OCDocker.OCScore.CLI package

Staged-pipeline CLI subcommands registered under ocdocker ocscore.

Submodules

• OCDocker.OCScore.CLI.reduce module
  • prepare_dudez_dataframe()
  • add_arguments()
  • build_argparser()
  • register_subparser()
  • cmd_reduce()
  • main()
  • main_from_args()
• OCDocker.OCScore.CLI.train module
  • ReductionArtifacts
  • StagedTrainingRun
  • add_arguments()
  • build_argparser()
  • register_subparser()
  • cmd_train()
  • resolve_reduction_source()
  • load_selected_features()
  • load_reduced_datasets()
  • load_reduction_artifacts()
  • load_merged_input_dataset()
  • apply_train_only_feature_reduction()
  • validate_selected_features()
  • prepare_pdbbind_for_optuna()
  • prepare_dudez_for_optuna()
  • copy_feature_reduction_artifacts()
  • build_protocol_context()
  • write_example_outputs()
  • main()
  • main_from_args()
• OCDocker.OCScore.CLI.export_tools module
  • DUDEZ_DATASET_VALUES
  • register_subparsers()
  • main()

Module contents

OCScore staged-pipeline CLI subcommands.

OCDocker.OCScore.CLI.register_subparsers(subparsers)

Register reduce, train, and export-tool subcommands.

Parameters:

subparsers (argparse._SubParsersAction) – OCScore command subparser registry from the main CLI.

Return type:

None